BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033C03LP1|AL429704
(906 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1785 0.0
>3x_Contig1655
Length = 16228
Score = 1785 bits (900), Expect = 0.0
Identities = 904/906 (99%)
Strand = Plus / Plus
Query: 1 tcaattgacgtctccgatttcgtattgtccaggttcgattaatcttaggtagtgattgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5436 tcaattgacgtctccgatttcgtattgtccaggttcgattaatcttaggtagtgattgca 5495
Query: 61 ttttggtgtctcttcctgaacatgcgatacgacaaaaacagttcctggccattgctcgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5496 ttttggtgtctcttcctgaacatgcgatacgacaaaaacagttcctggccattgctcgag 5555
Query: 121 gaactcatgggcccttatgagttgatcagtctctgttccggagaacgcttcgtcaagtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5556 gaactcatgggcccttatgagttgatcagtctctgttccggagaacgcttcgtcaagtat 5615
Query: 181 cataatttccggcatcttaaccgcagccctaacgaataatgcaatcttctgttcgctaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5616 cataatttccggcatcttaaccgcagccctaacgaataatgcaatcttctgttcgctaac 5675
Query: 241 agatagggatgcgaatgttttcttcgggtccaaatggaaataatcgatatacatatcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5676 agatagggatgcgaatgttttcttcgggtccaaatggaaataatcgatatacatatcaac 5735
Query: 301 aattcttttctgttcgtctgtwagtgtgttatgcgcttttaaaaagttgttggaactgac 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5736 aattcttttctgttcgtctgtaagtgtgttatgcgcttttaaaaagttgttggaactgac 5795
Query: 361 tgcatggaaccctgatgccactgtttctaacacagagaggtcaccagcgttcttcaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5796 tgcatggaaccctgatgccactgtttctaacacagagaggtcaccagcgttcttcaaaaa 5855
Query: 421 gagagcgtgcatctctggcgaagaaagaccaatccttttattaatgtcaaagaagttagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5856 gagagcgtgcatctctggcgaagaaagaccaatccttttattaatgtcaaagaagttagt 5915
Query: 481 gcttccggttcttctaggaacgccgtggtcaacaaatttggagttccaagactgtggatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5916 gcttccggttcttctaggaacgccgtggtcaacaaatttggagttccaagactgtggatg 5975
Query: 541 gtctgcagtgatcaaagatagcaaggttgacttaccagcaccattatttccttgaatatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5976 gtctgcagtgatcaaagatagcaaggttgacttaccagcaccattatttccttgaatatg 6035
Query: 601 ccatttggaaccttgtttgacatcccagtaaatatcttttaatactggttcgccactgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6036 ccatttggaaccttgtttgacatcccagtaaatatcttttaatactggttcgccactgta 6095
Query: 661 tgtaaccgacagaccttctagcgtgactactgatggaatcttcatcacatcatgatgtgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6096 tgtaaccgacagaccttctagcgtgactactgatggaatcttcatcacatcatgatgtgg 6155
Query: 721 gcttttatagtacttatgtggcgaaatcaaatcctcaatagtatacttactcttaggttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6156 gcttttatagtacttatgtggcgaaatcaaatcctcaatagtatacttactcttaggttt 6215
Query: 781 gtttagctgtagtacttctaacaattgcaacctcattgattcaacttggtctctatactg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6216 gtttagctgtagtacttctaacaattgcaacctcattgattcaacttggtctctatactg 6275
Query: 841 ctccatgggaccttggaactctataccatccttgtccacacacaccacgtgcgttcacca 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6276 ctccatgggaccttggaactctataccatccttgtccacacacaccacgtgcgtacacca 6335
Query: 901 gtctgg 906
||||||
Sbjct: 6336 gtctgg 6341
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5596
Number of Sequences: 1807
Number of extensions: 5596
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 906
length of database: 10,358,551
effective HSP length: 16
effective length of query: 890
effective length of database: 10,329,639
effective search space: 9193378710
effective search space used: 9193378710
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)